Enhancing extractive summarization with automatic post-processing

Tese de doutoramento, Informática (Ciência da Computação), Universidade de Lisboa, Faculdade de Ciências, 2015Any solution or device that may help people to optimize their time in doing productive work is of a great help. The steadily increasing amount of information that must be handled by each person everyday, either in their professional tasks or in their personal life, is becoming harder to be processed. By reducing the texts to be handled, automatic text summarization is a very useful procedure that can help to reduce significantly the amount of time people spend in many of their reading tasks. In the context of handling several texts, dealing with redundancy and focusing on relevant information the major problems to be addressed in automatic multi-document summarization. The most common approach to this task is to build a summary with sentences retrieved from the input texts. This approach is named extractive summarization. The main focus of current research on extractive summarization has been algorithm optimization, striving to enhance the selection of content. However, gains related to the increasing of algorithms complexity have not yet been proved, as the summaries remain difficult to be processed by humans in a satisfactory way. A text built fromdifferent documents by extracting sentences fromthemtends to form a textually fragile sequence of sentences, whose elements tend to be weakly related. In the present work, tasks that modify and relate the summary sentences are combined in a post-processing procedure. These tasks include sentence reduction, paragraph creation and insertion of discourse connectives, seeking to improve the textual quality of the final summary to be delivered to human users. Thus, this dissertation addresses automatic text summarization in a different perspective, by exploring the impact of the postprocessing of extraction-based summaries in order to build fluent and cohesive texts and improved summaries for human usage.Qualquer solução ou dispositivo que possa ajudar as pessoas a optimizar o seu tempo, de forma a realizar tarefas produtivas, é uma grande ajuda. A quantidade de informação que cada pessoa temque manipular, todos os dias, seja no trabalho ou na sua vida pessoal, é difícil de ser processada. Ao comprimir os textos a serem processados, a sumarização automática é uma tarefa muito útil, que pode reduzir significativamente a quantidade de tempo que as pessoas despendem em tarefas de leitura. Lidar com a redundância e focar na informação relevante num conjunto de textos são os principais objectivos da sumarização automática de vários documentos. A abordagem mais comum para esta tarefa consiste em construirse o resumo com frases obtidas a partir dos textos originais. Esta abordagem é conhecida como sumarização extractiva. O principal foco da investigação mais recente sobre sumarização extrativa é a optimização de algoritmos que visam obter o conteúdo relevante expresso nos textos originais. Porém, os ganhos relacionados com o aumento da complexidade destes algoritmos não foram ainda comprovados, já que os sumários continuam a ser difíceis de ler. É expectável que um texto, cujas frases foram extraídas de diferentes fontes, forme uma sequência frágil, sobretudo pela falta de interligação dos seus elementos. No contexto deste trabalho, tarefas que modificam e relacionam frases são combinadas numprocedimento denominado pós-processamento. Estas tarefas incluem a simplificação de frases, a criação de parágrafos e a inserção de conectores de discurso, que juntas procurammelhorar a qualidade do sumário final. Assim, esta dissertação aborda a sumarização automática numa perspectiva diferente, estudando o impacto do pós-processamento de um sumário extractivo, a fim de produzir um texto final fluente e coeso e em vista de se obter uma melhor qualidade textual.Fundação para a Ciência e a Tecnologia (FCT), SFRH/BD/45133/200

Levodopa-induced pseudopheochromocytoma

Pseudopheochromocytoma is a pathological condition presenting with paroxysmal hypertension with normal or moderate elevation in catecholamines and metanephrine levels, but no evidence of a tumoural cause. Imaging studies and I-123 metaiodobenzylguanidine scintigraphy are essential for exclusion of pheocromocytoma. We describe a case of pseudopheochromocytoma related to levodopa in a patient with paroxysmal hypertension, headache, sweating, palpitations and increased plasmatic and urinary metanephrine levels, without adrenal or extra-adrenal tumour. The beginning of the patient´s clinical symptoms coincided with the initiation of the levodopa treatment and the complete resolution of the symptoms occurred after the discontinuation of levodopa

Data-driven sentence simplification: Survey and benchmark

Sentence Simplification (SS) aims to modify a sentence in order to make it easier to read and understand. In order to do so, several rewriting transformations can be performed such as replacement, reordering, and splitting. Executing these transformations while keeping sentences grammatical, preserving their main idea, and generating simpler output, is a challenging and still far from solved problem. In this article, we survey research on SS, focusing on approaches that attempt to learn how to simplify using corpora of aligned original-simplified sentence pairs in English, which is the dominant paradigm nowadays. We also include a benchmark of different approaches on common datasets so as to compare them and highlight their strengths and limitations. We expect that this survey will serve as a starting point for researchers interested in the task and help spark new ideas for future developments

COVID-19 symptoms at hospital admission vary with age and sex: results from the ISARIC prospective multinational observational study

Background: The ISARIC prospective multinational observational study is the largest cohort of hospitalized patients with COVID-19. We present relationships of age, sex, and nationality to presenting symptoms. Methods: International, prospective observational study of 60 109 hospitalized symptomatic patients with laboratory-confirmed COVID-19 recruited from 43 countries between 30 January and 3 August 2020. Logistic regression was performed to evaluate relationships of age and sex to published COVID-19 case definitions and the most commonly reported symptoms. Results: ‘Typical’ symptoms of fever (69%), cough (68%) and shortness of breath (66%) were the most commonly reported. 92% of patients experienced at least one of these. Prevalence of typical symptoms was greatest in 30- to 60-year-olds (respectively 80, 79, 69%; at least one 95%). They were reported less frequently in children (≤ 18 years: 69, 48, 23; 85%), older adults (≥ 70 years: 61, 62, 65; 90%), and women (66, 66, 64; 90%; vs. men 71, 70, 67; 93%, each P < 0.001). The most common atypical presentations under 60 years of age were nausea and vomiting and abdominal pain, and over 60 years was confusion. Regression models showed significant differences in symptoms with sex, age and country. Interpretation: This international collaboration has allowed us to report reliable symptom data from the largest cohort of patients admitted to hospital with COVID-19. Adults over 60 and children admitted to hospital with COVID-19 are less likely to present with typical symptoms. Nausea and vomiting are common atypical presentations under 30 years. Confusion is a frequent atypical presentation of COVID-19 in adults over 60 years. Women are less likely to experience typical symptoms than men

Sistema de informação profissional

Trabalho de projecto de mestrado, Engenharia Informática, 2007, Faculdade de Ciências, Universidade de LisboaO presente trabalho descreve o projecto realizado no âmbito da disciplina Projecto em Engenharia Informática do Mestrado em Engenharia Informática da Faculdade de Ciências da Universidade de Lisboa. O projecto que lhe serve de base é o "Sistema de Informação Prisional" (SIP), desenvolvido pela Novabase Consulting para a Direcção-Geral dos Serviços Prisionais (DGSP). Esta aplicação contribui para a renovação da Administração Pública, inserindo-se no contexto da desburocratização e automatização dos processos dos Serviços Públicos. O sistema visa gerir os dados relativos aos reclusos dos estabelecimentos prisionais a nível nacional, sendo composto por vários subsistemas ou módulos que mapeiam um conjunto significativo de realidades do sistema prisional. Assim, a aplicação permite um controlo efectivo, centralizado e em tempo útil da informação existente no país. No contexto do SIP, detalha-se o subsistema de saúde, que serviu de base à realização deste trabalho. Este subsistema tem como objectivo gerir a história clínica dos reclusos. Na sua maior parte, o módulo já se encontrava desenvolvido, pelo que se procedeu à adição de novas funcionalidades e à reformulação de algumas das funcionalidades existentes, de acordo com as necessidades identificadas pelo cliente, tornando o sistema mais ágil e eficiente. O trabalho realizado no contexto do estágio consistiu, então, na análise conceptual das novas funcionalidades identificadas, na reformulação do desenho, na implementação dessas funcionalidades, na plataforma de desenvolvimento Oracle, e, finalmente, na realização de testes unitáriosThis work describes the project carried out in the scope of the discipline of Project in Software Engineering, of the Master in Software Engineering, of the Faculty of Sciences of Lisbon University. The work is based on the system Sistema de Informação Prisional SIP" (Portuguese Prison Data System), which has been developed by Novabase Consulting for the Directorate of Prison Services (DGSP). This system is a contribution for the modernization of the Public Administration, in the context of the Public Services automation initiative. The system aims to manage the data related to the prisoners in the establishments all over the country. It is composed by a number of subsystems or modules that map the multiple realities of the prison system. Therefore, an effective, central and timely information control is granted. In the SIP context, the health subsystem is detailed, being the core contribution to this work. The objective of this subsystem is to manage the prisoners' clinic history. Most of this module had already been developed, and so I have added new functionalities, while rebuilding some of the existent, according to the clients needs, and therefore making the system more efficient. The work done in the framework of the project consisted in the new functionalities conceptual analysis, the design revision, the implementation of those functionalities, in Oracle platform, and finally performing the unit test

Characterisation of microbial attack on archaeological bone

As part of an EU funded project to investigate the factors influencing bone preservation in the archaeological record, more than 250 bones from 41 archaeological sites in five countries spanning four climatic regions were studied for diagenetic alteration. Sites were selected to cover a range of environmental conditions and archaeological contexts. Microscopic and physical (mercury intrusion porosimetry) analyses of these bones revealed that the majority (68%) had suffered microbial attack. Furthermore, significant differences were found between animal and human bone in both the state of preservation and the type of microbial attack present. These differences in preservation might result from differences in early taphonomy of the bones. © 2003 Elsevier Science Ltd. All rights reserved

NEOTROPICAL XENARTHRANS: a data set of occurrence of xenarthran species in the Neotropics

Xenarthrans—anteaters, sloths, and armadillos—have essential functions for ecosystem maintenance, such as insect control and nutrient cycling, playing key roles as ecosystem engineers. Because of habitat loss and fragmentation, hunting pressure, and conflicts with domestic dogs, these species have been threatened locally, regionally, or even across their full distribution ranges. The Neotropics harbor 21 species of armadillos, 10 anteaters, and 6 sloths. Our data set includes the families Chlamyphoridae (13), Dasypodidae (7), Myrmecophagidae (3), Bradypodidae (4), and Megalonychidae (2). We have no occurrence data on Dasypus pilosus (Dasypodidae). Regarding Cyclopedidae, until recently, only one species was recognized, but new genetic studies have revealed that the group is represented by seven species. In this data paper, we compiled a total of 42,528 records of 31 species, represented by occurrence and quantitative data, totaling 24,847 unique georeferenced records. The geographic range is from the southern United States, Mexico, and Caribbean countries at the northern portion of the Neotropics, to the austral distribution in Argentina, Paraguay, Chile, and Uruguay. Regarding anteaters, Myrmecophaga tridactyla has the most records (n = 5,941), and Cyclopes sp. have the fewest (n = 240). The armadillo species with the most data is Dasypus novemcinctus (n = 11,588), and the fewest data are recorded for Calyptophractus retusus (n = 33). With regard to sloth species, Bradypus variegatus has the most records (n = 962), and Bradypus pygmaeus has the fewest (n = 12). Our main objective with Neotropical Xenarthrans is to make occurrence and quantitative data available to facilitate more ecological research, particularly if we integrate the xenarthran data with other data sets of Neotropical Series that will become available very soon (i.e., Neotropical Carnivores, Neotropical Invasive Mammals, and Neotropical Hunters and Dogs). Therefore, studies on trophic cascades, hunting pressure, habitat loss, fragmentation effects, species invasion, and climate change effects will be possible with the Neotropical Xenarthrans data set. Please cite this data paper when using its data in publications. We also request that researchers and teachers inform us of how they are using these data

Long-term neurological symptoms after acute COVID-19 illness requiring hospitalization in adult patients: insights from the ISARIC-COVID-19 follow-up study

in this study we aimed to characterize the type and prevalence of neurological symptoms related to neurological long-COVID-19 from a large international multicenter cohort of adults after discharge from hospital for acute COVID-19